Things and stuff

notebooks/3d.ipynb

@@ -246,7 +246,7 @@
    "execution_count": 28,
    "outputs": [],
    "source": [
-    "from notebooks.graphs import cr_n"
+    "from lib.graphs import cr_n"
    ],
    "metadata": {
     "collapsed": false
@@ -335,15 +335,6 @@
    "metadata": {
     "collapsed": false
    }
-  },
-  {
-   "cell_type": "code",
-   "execution_count": null,
-   "outputs": [],
-   "source": [],
-   "metadata": {
-    "collapsed": false
-   }
   }
  ],
  "metadata": {

notebooks/rust-3d.py

@@ -1,57 +0,0 @@
-from pathlib import Path
-import pandas as pd
-import numpy as np
-import matplotlib.pyplot as plt
-import scipy
-from glob import glob
-
-
-def read_3d(path: str):
-    df = pd.read_csv(path, skipinitialspace=True)
-    df['N'] = df.index + 1
-    df['r'] = (df.x ** 2 + df.y ** 2 + df.z ** 2) ** 0.5
-    df['cr'] = df.r.cummax()
-    df['fd'] = np.log(df.N) / np.log(df.cr)
-
-    return df
-
-
-def read_load_dir(load_dir: str):
-    paths = glob(f'{load_dir}/*.csv')
-    return [read_3d(path) for path in paths]
-
-
-def convergent_tail_index(series, tol):
-    diffs = np.abs(np.ediff1d(series))
-    for i in range(0, len(diffs)):
-        if np.max(diffs[i:]) <= tol:
-            return i
-
-    # No convergence found
-    return None
-
-
-def mean_of_tail(series, tol=0.05):
-    tail_index = convergent_tail_index(series, tol)
-    if tail_index is None:
-        raise Exception("No convergence found.")
-
-    return np.mean(series[tail_index:])
-
-
-def fd_stats(dfs):
-    fds = [mean_of_tail(df.fd, 0.01) for df in dfs]
-    fds_clean = [f for f in fds if f < np.inf]
-    return np.mean(fds_clean), np.std(fds_clean)
-
-df = read_3d("/Users/joshuacoles/Developer/checkouts/jc3091/CompB DLA/c-codebase/out-2.csv")
-print(mean_of_tail(df.fd, 0.01))
-
-df = read_3d("/Users/joshuacoles/Developer/checkouts/jc3091/CompB DLA/c-codebase/out-26n.csv")
-print(mean_of_tail(df.fd, 0.01))
-
-df = read_3d("/Users/joshuacoles/Developer/checkouts/jc3091/CompB DLA/c-codebase/out-26nn.csv")
-print(mean_of_tail(df.fd, 0.01))
-
-# dfs = read_load_dir("/Users/joshuacoles/Developer/checkouts/jc3091/CompB DLA/data-analysis/data/rust-3d-1/1")
-# print(fd_stats(dfs))