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158
notebooks/2d-3d-sp.ipynb
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notebooks/2d-3d-sp.ipynb
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@ -246,7 +246,7 @@
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"execution_count": 28,
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"outputs": [],
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"source": [
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"from notebooks.graphs import cr_n"
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"from lib.graphs import cr_n"
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],
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"metadata": {
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"collapsed": false
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"metadata": {
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"collapsed": false
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{
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"execution_count": null,
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"outputs": [],
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"source": [],
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"metadata": {
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}
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],
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"metadata": {
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@ -1,57 +0,0 @@
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from pathlib import Path
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import pandas as pd
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import numpy as np
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import matplotlib.pyplot as plt
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import scipy
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from glob import glob
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def read_3d(path: str):
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df = pd.read_csv(path, skipinitialspace=True)
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df['N'] = df.index + 1
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df['r'] = (df.x ** 2 + df.y ** 2 + df.z ** 2) ** 0.5
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df['cr'] = df.r.cummax()
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df['fd'] = np.log(df.N) / np.log(df.cr)
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return df
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def read_load_dir(load_dir: str):
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paths = glob(f'{load_dir}/*.csv')
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return [read_3d(path) for path in paths]
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def convergent_tail_index(series, tol):
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diffs = np.abs(np.ediff1d(series))
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for i in range(0, len(diffs)):
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if np.max(diffs[i:]) <= tol:
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return i
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# No convergence found
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return None
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def mean_of_tail(series, tol=0.05):
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tail_index = convergent_tail_index(series, tol)
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if tail_index is None:
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raise Exception("No convergence found.")
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return np.mean(series[tail_index:])
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def fd_stats(dfs):
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fds = [mean_of_tail(df.fd, 0.01) for df in dfs]
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fds_clean = [f for f in fds if f < np.inf]
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return np.mean(fds_clean), np.std(fds_clean)
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df = read_3d("/Users/joshuacoles/Developer/checkouts/jc3091/CompB DLA/c-codebase/out-2.csv")
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print(mean_of_tail(df.fd, 0.01))
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df = read_3d("/Users/joshuacoles/Developer/checkouts/jc3091/CompB DLA/c-codebase/out-26n.csv")
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print(mean_of_tail(df.fd, 0.01))
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df = read_3d("/Users/joshuacoles/Developer/checkouts/jc3091/CompB DLA/c-codebase/out-26nn.csv")
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print(mean_of_tail(df.fd, 0.01))
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# dfs = read_load_dir("/Users/joshuacoles/Developer/checkouts/jc3091/CompB DLA/data-analysis/data/rust-3d-1/1")
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# print(fd_stats(dfs))
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408
poetry.lock
generated
408
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name = "duckdb"
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version = "0.7.1"
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||||
]
|
||||
|
||||
[[package]]
|
||||
name = "executing"
|
||||
version = "1.2.0"
|
||||
@ -470,18 +527,18 @@ devel = ["colorama", "json-spec", "jsonschema", "pylint", "pytest", "pytest-benc
|
||||
|
||||
[[package]]
|
||||
name = "fonttools"
|
||||
version = "4.38.0"
|
||||
version = "4.39.2"
|
||||
description = "Tools to manipulate font files"
|
||||
category = "main"
|
||||
optional = false
|
||||
python-versions = ">=3.7"
|
||||
python-versions = ">=3.8"
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||||
files = [
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||||
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||||
[package.extras]
|
||||
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|
||||
all = ["brotli (>=1.0.1)", "brotlicffi (>=0.8.0)", "fs (>=2.2.0,<3)", "lxml (>=4.0,<5)", "lz4 (>=1.7.4.2)", "matplotlib", "munkres", "scipy", "skia-pathops (>=0.5.0)", "sympy", "uharfbuzz (>=0.23.0)", "unicodedata2 (>=15.0.0)", "xattr", "zopfli (>=0.1.4)"]
|
||||
graphite = ["lz4 (>=1.7.4.2)"]
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||||
interpolatable = ["munkres", "scipy"]
|
||||
lxml = ["lxml (>=4.0,<5)"]
|
||||
@ -491,7 +548,7 @@ repacker = ["uharfbuzz (>=0.23.0)"]
|
||||
symfont = ["sympy"]
|
||||
type1 = ["xattr"]
|
||||
ufo = ["fs (>=2.2.0,<3)"]
|
||||
unicode = ["unicodedata2 (>=14.0.0)"]
|
||||
unicode = ["unicodedata2 (>=15.0.0)"]
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||||
woff = ["brotli (>=1.0.1)", "brotlicffi (>=0.8.0)", "zopfli (>=0.1.4)"]
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||||
|
||||
[[package]]
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||||
@ -520,14 +577,14 @@ files = [
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||||
|
||||
[[package]]
|
||||
name = "ipykernel"
|
||||
version = "6.21.2"
|
||||
version = "6.21.3"
|
||||
description = "IPython Kernel for Jupyter"
|
||||
category = "main"
|
||||
optional = false
|
||||
python-versions = ">=3.8"
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||||
[package.dependencies]
|
||||
@ -764,14 +821,14 @@ test = ["codecov", "coverage", "ipykernel (>=6.14)", "mypy", "paramiko", "pre-co
|
||||
|
||||
[[package]]
|
||||
name = "jupyter-console"
|
||||
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||||
version = "6.6.3"
|
||||
description = "Jupyter terminal console"
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category = "main"
|
||||
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|
||||
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|
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|
||||
[package.dependencies]
|
||||
@ -789,19 +846,19 @@ test = ["flaky", "pexpect", "pytest"]
|
||||
|
||||
[[package]]
|
||||
name = "jupyter-core"
|
||||
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||||
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||||
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||||
[package.dependencies]
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||||
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|
||||
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|
||||
pywin32 = {version = ">=300", markers = "sys_platform == \"win32\" and platform_python_implementation != \"PyPy\""}
|
||||
traitlets = ">=5.3"
|
||||
|
||||
[package.extras]
|
||||
@ -835,14 +892,14 @@ test = ["click", "coverage", "pre-commit", "pytest (>=7.0)", "pytest-asyncio (>=
|
||||
|
||||
[[package]]
|
||||
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||||
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|
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|
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[package.dependencies]
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||||
@ -866,7 +923,7 @@ traitlets = ">=5.6.0"
|
||||
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|
||||
|
||||
[package.extras]
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||||
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|
||||
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|
||||
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|
||||
|
||||
[[package]]
|
||||
@ -1053,53 +1110,53 @@ files = [
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||||
|
||||
[[package]]
|
||||
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|
||||
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|
||||
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|
||||
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|
||||
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|
||||
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|
||||
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|
||||
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[package.dependencies]
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@ -1142,14 +1199,14 @@ files = [
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||||
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||||
[[package]]
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||||
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@ -1201,14 +1258,14 @@ test = ["ipykernel", "ipython", "ipywidgets", "nbconvert (>=7.0.0)", "pytest (>=
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[[package]]
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[[package]]
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||||
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|
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@ -1567,14 +1624,14 @@ tests = ["check-manifest", "coverage", "defusedxml", "markdown2", "olefile", "pa
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[[package]]
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||||
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|
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@ -1665,6 +1722,44 @@ files = [
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|
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[[package]]
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{file = "pyzmq-25.0.1-pp39-pypy39_pp73-manylinux_2_17_x86_64.manylinux2014_x86_64.whl", hash = "sha256:44db5162a6881f7d740dec65917f38f9bfbc5ad9a10e06d7d5deebb27eb63939"},
|
||||
{file = "pyzmq-25.0.1-pp39-pypy39_pp73-manylinux_2_28_x86_64.whl", hash = "sha256:f38bf2c60a3f7b87cf5177043eb7a331a4f53bc9305a2452decbd42ad0c98741"},
|
||||
{file = "pyzmq-25.0.1-pp39-pypy39_pp73-win_amd64.whl", hash = "sha256:b1cf4becd15669bc62a41c1b1bb742e22ac25965134e4254cde82a4dc2554b1b"},
|
||||
{file = "pyzmq-25.0.1.tar.gz", hash = "sha256:44a24f7ce44e70d20e2a4c9ba5af70b4611df7a4b920eed2c8e0bdd5a5af225f"},
|
||||
]
|
||||
|
||||
[package.dependencies]
|
||||
@ -1965,14 +2060,14 @@ cffi = {version = "*", markers = "implementation_name == \"pypy\""}
|
||||
|
||||
[[package]]
|
||||
name = "qtconsole"
|
||||
version = "5.4.0"
|
||||
version = "5.4.1"
|
||||
description = "Jupyter Qt console"
|
||||
category = "main"
|
||||
optional = false
|
||||
python-versions = ">= 3.7"
|
||||
files = [
|
||||
{file = "qtconsole-5.4.0-py3-none-any.whl", hash = "sha256:be13560c19bdb3b54ed9741a915aa701a68d424519e8341ac479a91209e694b2"},
|
||||
{file = "qtconsole-5.4.0.tar.gz", hash = "sha256:57748ea2fd26320a0b77adba20131cfbb13818c7c96d83fafcb110ff55f58b35"},
|
||||
{file = "qtconsole-5.4.1-py3-none-any.whl", hash = "sha256:bae8c7e10170cdcdcaf7e6d53ad7d6a7412249b9b8310a0eaa6b6f3b260f32db"},
|
||||
{file = "qtconsole-5.4.1.tar.gz", hash = "sha256:f67a03f40f722e13261791280f73068dbaf9dafcc335cbba644ccc8f892640e5"},
|
||||
]
|
||||
|
||||
[package.dependencies]
|
||||
@ -1980,6 +2075,7 @@ ipykernel = ">=4.1"
|
||||
ipython-genutils = "*"
|
||||
jupyter-client = ">=4.1"
|
||||
jupyter-core = "*"
|
||||
packaging = "*"
|
||||
pygments = "*"
|
||||
pyzmq = ">=17.1"
|
||||
qtpy = ">=2.0.1"
|
||||
@ -2306,4 +2402,4 @@ files = [
|
||||
[metadata]
|
||||
lock-version = "2.0"
|
||||
python-versions = "3.10.6"
|
||||
content-hash = "f99fe3b7dc19a4157887f28fee63583200de559d1e01aa64954bad915fe16dc4"
|
||||
content-hash = "d3cd4683c5a8054a197275607ccf4a9668f9c08e5873aaef673f6e94e07b3051"
|
||||
|
||||
@ -12,7 +12,8 @@ jupyter = "^1.0.0"
|
||||
pandas = "^1.5.3"
|
||||
scipy = "^1.10.1"
|
||||
matplotlib = "^3.7.0"
|
||||
|
||||
duckdb="^0.7.1"
|
||||
pyarrow="^11.0.0"
|
||||
|
||||
[build-system]
|
||||
requires = ["poetry-core"]
|
||||
|
||||
Loading…
Reference in New Issue
Block a user